@article{abramson2024af3,
  author  = {Abramson, Josh and Adler, Jonas and Dunger, Jack and others},
  title   = {Accurate structure prediction of biomolecular interactions with {AlphaFold 3}},
  journal = {Nature},
  volume  = {630},
  pages   = {493--500},
  year    = {2024},
  doi     = {10.1038/s41586-024-07487-w},
  url     = {https://doi.org/10.1038/s41586-024-07487-w}
}

@inproceedings{yi2025adflip,
  author    = {Yi, Kai and Jamali, Kiarash and Scheres, Sjors H. W.},
  title     = {All-atom inverse protein folding through discrete flow matching},
  booktitle = {Proceedings of the 42nd International Conference on Machine Learning},
  series    = {Proceedings of Machine Learning Research},
  volume    = {267},
  pages     = {72244--72257},
  year      = {2025},
  publisher = {PMLR},
  url       = {https://proceedings.mlr.press/v267/yi25a.html}
}

@unpublished{yi2026guideflip,
  author = {Yi, Kai and Chen, Qingchao and Zhang, Dongqi and Tian, Pengfei and
            Wagstaff, Jane and McLaughlin, Stephen and Tate, Christopher G. and
            Jamali, Kiarash and Scheres, Sjors H. W.},
  title  = {De novo design of flexible protein interactions with {GuideFlip}},
  year   = {2026},
  note   = {Unpublished manuscript}
}